User:Eneumann/Kinases
[edit] Some Kinases Collections
extracted from [1]
[edit] CMGC Group
http://eneumann.org/exhibit/kinase_demo/item#p38%20(alpha%2Cbeta%2Cgamma%2Cdelta) p38 (alpha,beta,gamma,delta) Kinase http://eneumann.org/exhibit/kinase_demo/item#p38%20(alpha%2Cbeta%2Cgamma%2Cdelta) p38 (alpha,beta,gamma,delta) Cancer Inflammation CMGC Four closely related isoforms (alpha,beta,gamma,delta) involved in apoptosis and stress reponses. Mediate actions of pro-inflammatory cytokines, inhibitors under development to treat inflammation, autoimmunity, diabetes, and cancer (Medline:12725866, 12783612, 12790339). Inhibitors: doramapimod/BIRB-796 (Boehringer Ingelheim, Phase 2-3 for psoriasis, crohn's disease and arthritis), SCIO-469, SCIO-323 (Scios, Phase 1 arthritis), AMG-548 (Amgen), ARQ-101 (ArQule), CDP-11 (Celltech), VX-702 (Vertex, Phase 2 acute coronary syndrome). OMIM Gene Id: 600289, 602898, 602899, 602399.warning.png"Four closely related isoforms (alpha,beta,gamma,delta) involved in apoptosis and stress reponses. Mediate actions of pro-inflammatory cytokines, inhibitors under development to treat inflammation, autoimmunity, diabetes, and cancer (Medline:12725866, 12783612, 12790339). Inhibitors: doramapimod/BIRB-796 (Boehringer Ingelheim, Phase 2-3 for psoriasis, crohn's disease and arthritis), SCIO-469, SCIO-323 (Scios, Phase 1 arthritis), AMG-548 (Amgen), ARQ-101 (ArQule), CDP-11 (Celltech), VX-702 (Vertex, Phase 2 acute coronary syndrome). OMIM Gene Id: 600289, 602898, 602899, 602399." cannot be used as a page name in this wiki. 602399 http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#p38%20(alpha%2Cbeta%2Cgamma%2Cdelta)
http://eneumann.org/exhibit/kinase_demo/item#CDK6
CDK6
Kinase
Mutant_Gene
http://eneumann.org/exhibit/kinase_demo/item#CDK6
CDK6
cyclin-dependent kinase 6
Cancer
CMGC
Overexpressed and/or disrupted by translocation in leukemias, lymphomas and other cancers and amplified in gliomas (Medline:9102208) and rodent cancers (Medline:12538879, 11719459). OMIM Gene Id: 603368.
603368
Overexpression
Translocation
L
Dom
ALL
T
MLLT10
7q21-q22
Somatic
7
CDK6
1021
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#CDK6
http://eneumann.org/exhibit/kinase_demo/item#CDK9
CDK9
Kinase
http://eneumann.org/exhibit/kinase_demo/item#CDK9
CDK9
Viral infection
Cardiovascular
CMGC
Transcriptional elongation factor and cofactor for HIV Tat protein, RNAi against CDK9 blocks HIV replication, and inhibitors also block varicella zoster replication. Mediates signals leading to cardiac hypertrophy (Medline:12695656). Inhibitor: Flavopiridol. OMIM Gene Id: 603251.warning.png"Transcriptional elongation factor and cofactor for HIV Tat protein, RNAi against CDK9 blocks HIV replication, and inhibitors also block varicella zoster replication. Mediates signals leading to cardiac hypertrophy (Medline:12695656). Inhibitor: Flavopiridol. OMIM Gene Id: 603251." cannot be used as a page name in this wiki.
603251
Expression
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#CDK9
http://eneumann.org/exhibit/kinase_demo/item#CDK2
CDK2
Kinase
http://eneumann.org/exhibit/kinase_demo/item#CDK2
CDK2
Cancer
CMGC
Cell cycle checkpoint, and part of the Rb pathway disregulated in most tumors (Medline:12888290). Target of several candidate cancer drugs. However, inhibition does not always prevent cancer cell growth (Medline:12676582), possibly due to CDK redundancy. Inhibitors: BMS-265246, BMS-265246-01 (Bristol-Myers Squibb), R-roscovitine (CYC200, CYC202) (Cyclacel), SU9516 (Sugen), L868276. OMIM Gene Id: 116953.warning.png"Cell cycle checkpoint, and part of the Rb pathway disregulated in most tumors (Medline:12888290). Target of several candidate cancer drugs. However, inhibition does not always prevent cancer cell growth (Medline:12676582), possibly due to CDK redundancy. Inhibitors: BMS-265246, BMS-265246-01 (Bristol-Myers Squibb), R-roscovitine (CYC200, CYC202) (Cyclacel), SU9516 (Sugen), L868276. OMIM Gene Id: 116953." cannot be used as a page name in this wiki.
116953
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#CDK2
http://eneumann.org/exhibit/kinase_demo/item#GSK3alpha%20and%20GSK3beta
GSK3alpha and GSK3beta
Kinase
http://eneumann.org/exhibit/kinase_demo/item#GSK3alpha%20and%20GSK3beta
GSK3alpha and GSK3beta
Neurodegeneration
Diabetes
Cardiovascular
CNS
CMGC
[[Notes:=GSK3alpha and GSK3beta have similar functions and are covered together here. GSK3alpha phophorylates tau, the principal component of neurofibrillary tangles in Alzheimer disease [MIM:104300]. GSK3alpha is also required for maximal production of amyloid plaque peptides by g secretase. A GSK3beta promoter SNP effects progression of bipolar disorder [MIM:125480]. The GSK3 inhibitor, lithium, is used to treat bipolar disorder and is seen to block plaque formation. GSK3 generally opposes the action of insulin, and GSK3 hyperactivity is thought to contribute to insulin resistant (type II) diabetes (Medline:15102436, 15078145). GSK3beta also negatively regulates cardiac hypertrophy (Medline:12039794). A tumor suppressor role is indicated by the oncogenic potential of stabilized b-catenin mutants that lack GSK3 phosphorylation sites, but no oncogenic mutants have been reported. Inhibitor: AR-A014418 (Astra Zeneca). OMIM Gene Id: 606784, 605004.]]
605004
SNP
Activated
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#GSK3alpha%20and%20GSK3beta
http://eneumann.org/exhibit/kinase_demo/item#HIPK1
HIPK1
Kinase
http://eneumann.org/exhibit/kinase_demo/item#HIPK1
HIPK1
Cancer
CMGC
Expression elevated in many breast cancer cell lines. Null mice are resistant to carcinogens. Binds the p53 tumor suppressor (Medline:12702766). OMIM Gene Id: 608003.
608003
Overexpression
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#HIPK1
http://eneumann.org/exhibit/kinase_demo/item#HIPK2
HIPK2
Kinase
http://eneumann.org/exhibit/kinase_demo/item#HIPK2
HIPK2
Cancer
CMGC
Possible tumor suppressor. Activates p53 in response to UV light, causing growth arrest and apoptosis. Required for cisplatin-induced apoptosis (Medline:14729469). Downregulated in breast and thyroid carcinomas. OMIM Gene Id: 606868.
606868
Loss-of-heterozygosity
Expression
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#HIPK2
http://eneumann.org/exhibit/kinase_demo/item#CDC2%20(CDK1)
CDC2 (CDK1)
Kinase
http://eneumann.org/exhibit/kinase_demo/item#CDC2%20(CDK1)
CDC2 (CDK1)
Cancer
CMGC
Cell cycle checkpoint. Activated in many cancers including colon, liver and breast (Medline:10091728, 12100577, 11091571). The DT isoform, which lacks a regulatory region, is expressed in breast cancer. Inhibition in cancer cells may drive cells into apoptosis (Medline:12150824). May also drive cell migration (Medline:12771130). Inhibitors: BMS-265246, BMS-265246-01 (Bristol-Myers Squibb). OMIM Gene Id: 116940.warning.png"Cell cycle checkpoint. Activated in many cancers including colon, liver and breast (Medline:10091728, 12100577, 11091571). The DT isoform, which lacks a regulatory region, is expressed in breast cancer. Inhibition in cancer cells may drive cells into apoptosis (Medline:12150824). May also drive cell migration (Medline:12771130). Inhibitors: BMS-265246, BMS-265246-01 (Bristol-Myers Squibb). OMIM Gene Id: 116940." cannot be used as a page name in this wiki.
116940
Activated
Splice-Change
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#CDC2%20(CDK1)
http://eneumann.org/exhibit/kinase_demo/item#Erk5%20(BMK1)
Erk5 (BMK1)
Kinase
http://eneumann.org/exhibit/kinase_demo/item#Erk5%20(BMK1)
Erk5 (BMK1)
Cancer
Cardiovascular
CMGC
Mouse knockout shows a role in development and integrity of blood vessels. May block apoptosis in endothelial cells (Medline:14670836). Required for transduction of EGF growth signal (Medline: 9790194), constitutively activated in ErbB2-overexpressing breast cancer (Medline: 11739740), and downstream of activated Mek5 in metastatic prostate cancer (Medline: 12618764). Inhibitor: PD98059. OMIM Gene Id: 602521.warning.png"Mouse knockout shows a role in development and integrity of blood vessels. May block apoptosis in endothelial cells (Medline:14670836). Required for transduction of EGF growth signal (Medline: 9790194), constitutively activated in ErbB2-overexpressing breast cancer (Medline: 11739740), and downstream of activated Mek5 in metastatic prostate cancer (Medline: 12618764). Inhibitor: PD98059. OMIM Gene Id: 602521." cannot be used as a page name in this wiki.
602521
Expression
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#Erk5%20(BMK1)
http://eneumann.org/exhibit/kinase_demo/item#JNK3
JNK3
Kinase
http://eneumann.org/exhibit/kinase_demo/item#JNK3
JNK3
Cancer
CNS
CMGC
Brain-selective Jnk isoform. Pro-apoptotic gene and potential tumor suppressor. Expression lost in brain tumors (Medline:11322657). May function in neuronal cell death from injury and neurodegeneration, for which inhibitors are being developed (Medline:15501728, 14657393, 14704277). OMIM Gene Id: 602897.warning.png"Brain-selective Jnk isoform. Pro-apoptotic gene and potential tumor suppressor. Expression lost in brain tumors (Medline:11322657). May function in neuronal cell death from injury and neurodegeneration, for which inhibitors are being developed (Medline:15501728, 14657393, 14704277). OMIM Gene Id: 602897." cannot be used as a page name in this wiki.
602897
Expression
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#JNK3
http://eneumann.org/exhibit/kinase_demo/item#JNK1
JNK1
Kinase
http://eneumann.org/exhibit/kinase_demo/item#JNK1
JNK1
Cancer
Diabetes
Inflammation
CMGC
Activity increased in obesity. Inhibition or mouse knockout increases insulin sensitivity (Medline:12447443). Part of NFκB pathway involved in inflammation and cancer, and signals downstream of Ras, though possibly as an apoptotic negative regulator of growth (Medline:12734425). OMIM Gene Id: 601158.warning.png"Activity increased in obesity. Inhibition or mouse knockout increases insulin sensitivity (Medline:12447443). Part of NFκB pathway involved in inflammation and cancer, and signals downstream of Ras, though possibly as an apoptotic negative regulator of growth (Medline:12734425). OMIM Gene Id: 601158." cannot be used as a page name in this wiki.
601158
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#JNK1
http://eneumann.org/exhibit/kinase_demo/item#Dyrk1A
Dyrk1A
Kinase
http://eneumann.org/exhibit/kinase_demo/item#Dyrk1A
Dyrk1A
Cognition
CMGC
Candidate gene for some aspects of Down's Syndrome: located in DS critical region, and overexpression in mice gives rise to similar neurological abnormalities (Medline: 15198122). OMIM Gene Id: 600855.
600855
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#Dyrk1A
http://eneumann.org/exhibit/kinase_demo/item#CDK4
CDK4
Kinase
Mutant_Gene
http://eneumann.org/exhibit/kinase_demo/item#CDK4
CDK4
cyclin-dependent kinase 4
Cancer
CMGC
Point mutations found in somatic and familial melanoma. Amplified in sarcomas (Medline:9703873, 9935200), glioma (Medline: 14756442) and lymphoma (Medline: 12203778). Amplified, methylated or deleted in head and neck squamous cell carcinoma (Medline: 14586645). Overexpression drives epithelial tumors in mice (Medline: 14647432). Disruption makes mice resistant to cancer (Medline: 12435633). Inhibitor: PD332991 (Onyx). OMIM Gene Id: 123829.warning.png"Point mutations found in somatic and familial melanoma. Amplified in sarcomas (Medline:9703873, 9935200), glioma (Medline: 14756442) and lymphoma (Medline: 12203778). Amplified, methylated or deleted in head and neck squamous cell carcinoma (Medline: 14586645). Overexpression drives epithelial tumors in mice (Medline: 14647432). Disruption makes mice resistant to cancer (Medline: 12435633). Inhibitor: PD332991 (Onyx). OMIM Gene Id: 123829." cannot be used as a page name in this wiki.
123829
Activated
Gain-of-function Mutation
Amplified
Methylation
E
Dom
Mis
12q14
melanoma
Germline
Familial malignant melanoma
12
CDK4
1019
http://eneumann.org/exhibit/kinase_demo/kinases_vu.html#CDK4